Journal of Clinical Microbiology

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Q3 lab-on-chip real-time PCR for the diagnosis of Leishmania infantum infection in dogs
by Maria Stefania LatrofaMarco CeredaViviane Noll Louzada-FloresFilipe Dantas-TorresDomenico Otranto1Department of Veterinary Medicine, University of Bari, Bari, Italy2STMicroelectronics Srl, Agrate Brianza (MB), Italy3Instituto Aggeu Magalhães, Fundação Oswaldo Cruz (Fiocruz), Recife, Pernambuco, Brazil4Department of Veterinary Clinical Sciences, City University of Hong Kong, Kowloon Tong, Hong Kong on April 25, 2024 at 7:00 am
Construction of the ETECFinder database for the characterization of enterotoxigenic Escherichia coli (ETEC) and revision of the VirulenceFinder web tool at the CGE website
by Flemming ScheutzCamilla Hald NielsenAstrid von Mentzer1The International Escherichia and Klebsiella Centre, Statens Serum Institut, Copenhagen, Denmark2Department of Bacteria, Parasites and Fungi, Statens Serum Institut, Copenhagen, Denmark3Department of Microbiology and Immunology, Institute of Biomedicine, Sahlgrenska Academy, University of Gothenburg, Gothenburg, Sweden on April 24, 2024 at 7:00 am
Diagnosis, management, and outcomes of parechovirus infections in infants: an overview
by Anjana SasidharanChristopher J. HarrisonRangaraj Selvarangan1Department of Pathology and Laboratory Medicine, Children’s Mercy Hospital and Clinics, Kansas City, Missouri, USA2University of Missouri, College of Medicine, Kansas City, Missouri, USA on April 22, 2024 at 7:00 am
Multi-center evaluation of the Research Use Only NeuMoDx monkeypox virus (MPXV) fully automated real-time PCR assay
by Heba H. MostafaGavin WallSzu-Chi SuGerta HysaLijie GongUrbain Charly DadjeuHelen CheungAndrew PekoszDelphine De SmetNikola SklenovskáLies LaenenLaura ViñuelaAdolfo de SalazarAna FuentesElizaveta PadalkoFederico Garcia1Division of Medical Microbiology, Department of Pathology, Johns Hopkins School of Medicine, Baltimore, Maryland, USA2QIAGEN GmbH, Hilden, Germany3NeuMoDx Molecular Inc, a QIAGEN company, Ann Arbor, Michigan, USA4W. Harry Feinstone Department of Molecular Microbiology and Immunology, The Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland, USA5Universitair Ziekenhuis Gent, Gent, Belgium6Laboratory of Clinical and Epidemiological, Virology, Department of Microbiology, Immunology and Transplantation, Rega Institute, KU Leuven, Leuven, Belgium7Department of Laboratory Medicine, University Hospitals Leuven, Leuven, Belgium8Laboratory of Clinical Microbiology, Department of Microbiology, Immunology and Transplantation, KU Leuven, Leuven, Belgium9Hospital Universitario Clínico San Cecilio, Granada, Spain10Instituto de Investigación Biosanitaria IBS.GRANADA, Granada, Spain11Ciber de Enfermedades Infecciosas, CIBERINFEC, Madrid, Spain on April 19, 2024 at 7:00 am
Development of advanced control material for reverse transcription-mediated bacterial nucleic acid amplification tests
by Janessa D. LewisStephen J. Salipante1Department of Laboratory Medicine and Pathology, University of Washington School of Medicine, Seattle, Washington, USA on April 17, 2024 at 7:00 am
Evaluation of false-positive Rhodotorula detections by a multiplex PCR-based fungal panel performed on positive blood culture bottles
by Robert Hamilton-SethVincent StrevaNatalie GammelVictoria L. CampodónicoPatricia J. SimnerSean X. ZhangKaren C. Carroll1Department of Pathology, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA2Pathology and Laboratory Medicine, Northwell Health Laboratories, Queens, New York, USA3Microbiology Division, Johns Hopkins Hospital, Baltimore, Maryland, USA on April 17, 2024 at 7:00 am
Development of an automated amplicon-based next-generation sequencing pipeline for rapid detection of bacteria and fungi directly from clinical specimens
by Lucas J. OsbornJohn FisselSamantha GomezJavier MestasJessica Flores-VazquezJaehyeon LeeHesamedin HakimjavadiCristina CostalesJennifer Dien Bard1Department of Pathology and Laboratory Medicine, Children’s Hospital Los Angeles, Los Angeles, California, USA2Department of Laboratory Medicine, Jeonbuk National University Medical School and Hospital, Jeonju, Jeollabukdo, South Korea3Keck School of Medicine, University of Southern California, Los Angeles, California, USA on April 16, 2024 at 7:00 am
Biographical Feature: Charles Y. Chiu, M.D., Ph.D.
by Erik Munson1Department of Medical Laboratory Science, Marquette University, Milwaukee, Wisconsin, USA on April 15, 2024 at 7:00 am
Retraction for Waters et al., “Regulated Expression of the Beta2-Toxin Gene (cpb2) in Clostridium perfringens Type A Isolates from Horses with Gastrointestinal Diseases”
by Michael WatersDeepa RajuHelen S. GarmoryMichel R. PopoffMahfuzur R. Sarker on April 12, 2024 at 7:00 am
Retraction for Waters et al., “Genotyping and Phenotyping of Beta2-Toxigenic Clostridium perfringens Fecal Isolates Associated with Gastrointestinal Diseases in Piglets
by Michael WatersAmanda SavoieHelen S. GarmoryDawn BueschelMichel R. PopoffJ. Glenn SongerRichard W. TitballBruce A. McClaneMahfuzur R. Sarker on April 12, 2024 at 7:00 am
Dynamics and prognostic value of plasma cell-free DNA PCR in patients with invasive aspergillosis and mucormycosis
by Angel MorenoJordan MahIndre BudvytieneDora Y. HoHayden T. SchwenkNiaz Banaei1Department of Pathology, Stanford University School of Medicine, Stanford, California, USA2Clinical Microbiology Laboratory, Stanford Health Care, Palo Alto, California, USA3Division of Infectious Diseases and Geographic Medicine, Department of Medicine, Stanford University, Stanford, California, USA4Division of Infectious Diseases, Department of Pediatrics, Stanford University School of Medicine, Stanford, California, USA on April 11, 2024 at 7:00 am
Performance of two modified two-tier algorithms for the serologic diagnosis of Lyme disease
by Marie L. LandrySajjad HassanBruce G. RottmannStacey J. PesakMichael OrdazzoMichael SkrzyniarzSteven DeponteDavid R. Peaper1Department of Laboratory Medicine, Yale University School of Medicine, New Haven, Connecticut, USA2Department of Medicine, Yale University School of Medicine, New Haven, Connecticut, USA3Yale New Haven Hospital, New Haven, Connecticut, USA on April 10, 2024 at 7:00 am
Development and evaluation of an artificial intelligence for bacterial growth monitoring in clinical bacteriology
by Damien JacotShklqim GizhaCedrick OrnyMathieu FernandesCarmelo TricoliRaphael MarcelpoilGuy Prod'homJean-Marc VolleGilbert GreubAntony Croxatto1Institute of Microbiology, Lausanne University Hospital and University of Lausanne, Lausanne, Switzerland2Becton Dickinson Kiestra, Le Pont-de-Claix, France3Infectious Diseases Service, Department of Medicine, Lausanne University Hospital and University of Lausanne, Lausanne, Switzerland4ADMED, Department of Microbiology, La Chaux-de-Fonds, Switzerland on April 4, 2024 at 7:00 am
Erratum for Brown-Elliott et al., "Emergence of Inducible Macrolide Resistance in Mycobacterium chelonae Due to Broad-Host-Range Plasmid and Chromosomal Variants of the Novel 23S rRNA Methylase Gene, erm(55)"
by Barbara A. Brown-ElliottRichard J. WallaceNancy L. WengenackSean D. WorkmanAndrew D. S. CameronGeorgie BushM. Dolores HughesStephanie MeltonBibiana Gonzalez-RamirezEliana RodriguezKavya SomayajiCourtney KlapperichMary ViersAyooluwa J. BolajiEmma RempelDavid C. Alexander on April 4, 2024 at 7:00 am
An evolution of Nanopore next-generation sequencing technology: implications for medical microbiology and public health
by Heba H. Mostafa1Department of Pathology, Division of Medical Microbiology, Johns Hopkins School of Medicine, Baltimore, Maryland, USA on April 2, 2024 at 7:00 am
Automated detection of methicillin-resistant Staphylococcus aureus with the MRSA CHROM imaging application on BD Kiestra Total Lab Automation System
by Erin McElvaniaSusan MindelJaap LemstraKarin BrandsParul PatelCaryn E. GoodDidier MorelCedrick OrnyJean-Marc VolleMarc DesjardinsDaniel Rhoads1Northshore University Health System, Evanston, Illinois, USA2Becton, Dickinson and Company– Integrated Diagnostic Solutions, Sparks, Maryland, USA3BD Kiestra BV, Drachten, the Netherlands4University Hospitals Cleveland Medical Center, Cleveland, Ohio, USA5Becton, Dickinson and Company – HEOR & RWE Data Science, Eybens Isere, France6Becton, Dickinson and Company – Innovation Software Engineering, Eybens Isere, France7Eastern Ontario Regional Laboratory Association, Ottawa, Ontario, Canada8Cleveland Clinic, Cleveland, Ohio, USA on April 1, 2024 at 7:00 am
CMV-RNAemia as new marker of active viral replication in transplant recipients
by Giulia PiccirilliFederica LannaLiliana GabrielliVincenzo MottaMartina FranceschielloAlessia CantianiMatteo PavoniMarta LeoneEva Caterina BorgattiDino GibertoniRenato PascaleMaddalena GiannellaFrancesca BonifaziTiziana Lazzarotto1Microbiology Unit, IRCCS Azienda Ospedaliero-Universitaria di Bologna, Bologna, Italy2Department of Medical and Surgical Sciences, Alma Mater Studiorum, University of Bologna, Bologna, Italy3Research and Innovation Unit, IRCCS Azienda Ospedaliero-Universitaria di Bologna, Bologna, Italy4Infectious Diseases Unit, Department for Integrated Infectious Risk Management, IRCCS Azienda Ospedaliero-Universitaria di Bologna, Bologna, Italy5IRCCS Azienda Ospedaliero-Universitaria di Bologna, Istituto di Ematologia “Seràgnoli”, Bologna, Italy on March 27, 2024 at 7:00 am
Sensitivity and specificity of the new Bio-Rad HIV screening test, Access HIV combo V2
by Vincent GuiraudYann CiczoraMuriel CardonaChristine DeferSandrine GréaumeDavid NoguesAgnès Gautheret-Dejean1AP-HP, Hôpitaux Universitaires La Pitié Salpêtrière-Charles Foix, Service de Virologie, Paris, France2Bio-Rad Laboratories, Steenvoorde, France3Bio-Rad Laboratories, Marnes-La-Coquette, France4Etablissement Français du Sang (EFS) Hauts de France—Normandie, Lille, France5Etablissement Français du Sang (EFS) Hauts de France—Normandie, Bois-Guillaume, France6Université Paris cité, INSERM UMR-S 1139 Physiopathologie et pharmacotoxicologie placentaire humaine: microbiote pré & post-natal, Paris, France on March 27, 2024 at 7:00 am
The modern alchemy of clinical pathology: turning the output of microbiology laboratory operations into gold
by Sanjat Kanjilal1Department of Population Medicine, Harvard Pilgrim Healthcare Institute and Harvard Medical School, Boston, Massachusetts, USA2Division of Infectious Diseases, Brigham & Women's Hospital, Boston, Massachusetts, USA on March 20, 2024 at 7:00 am
Closing the gap: Oxford Nanopore Technologies R10 sequencing allows comparable results to Illumina sequencing for SNP-based outbreak investigation of bacterial pathogens
by Bert BogaertsAn Van den BosscheBavo VerhaegenLaurence DelbrassinneWesley MattheusStéphanie NouwsMaxime GodfroidStefan HoffmanNancy H. C. RoosensSigrid C. J. De KeersmaeckerKevin Vanneste1Transversal activities in Applied Genomics, Sciensano, Brussels, Belgium2Bacterial Diseases, Sciensano, Brussels, Belgium3Foodborne Pathogens, Sciensano, Brussels, Belgium on March 5, 2024 at 8:00 am